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STRINGSTRING
PP1S99_257V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S99_257V6.2" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S99_257V6.2Predicted protein (186 aa)    
Predicted Functional Partners:
PP1S96_56V6.2
Predicted protein (363 aa)
   
 
  0.977
PP1S35_261V6.1
Predicted protein (368 aa)
   
 
  0.977
PP1S402_22V6.1
Predicted protein (289 aa)
   
   
  0.831
PP1S93_67V6.1
Predicted protein (307 aa)
   
   
  0.826
PP1S15_445V6.1
Predicted protein; Belongs to the SecY/SEC61-alpha family (543 aa)
     
   
  0.791
PP1S268_3V6.1
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins (304 aa)
   
   
  0.765
PP1S143_175V6.1
Peptidyl-prolyl cis-trans isomerase (220 aa)
   
        0.734
PP1S51_261V6.1
Predicted protein (324 aa)
   
   
  0.728
PP1S34_360V6.1
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (632 aa)
     
 
  0.727
PP1S98_142V6.1
Predicted protein (386 aa)
   
   
  0.712
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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