STRINGSTRING
PP1S9_14V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S9_14V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S9_14V6.1annotation not available (53 aa)    
Predicted Functional Partners:
PP1S54_136V6.1
annotation not available (1001 aa)
     
 
  0.965
CHR1515
annotation not available (3163 aa)
     
 
  0.946
CHR1545
annotation not available (3255 aa)
     
 
  0.946
GTB1502
annotation not available (1833 aa)
   
 
  0.944
GTB1501
annotation not available (1648 aa)
   
 
  0.944
PP1S355_21V6.1
Predicted protein (752 aa)
     
 
  0.941
PP1S2_36V6.1
annotation not available (563 aa)
     
 
  0.941
ARP1509
Actin-related protein Arp4 ; Belongs to the actin family (438 aa)
     
 
  0.925
ARP1508
Actin-related protein ARP4 ; Belongs to the actin family (435 aa)
     
 
  0.925
CHB1502
Chromatin remodeling factor subunit (897 aa)
     
 
  0.914
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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