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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S9_232V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S9_232V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S9_232V6.1annotation not available (574 aa)    
Predicted Functional Partners:
PP1S169_130V6.3
Predicted protein (405 aa)
   
 
  0.996
PP1S263_36V6.1
Predicted protein (415 aa)
   
 
  0.963
PP1S370_61V6.1
Threonine dehydratase (670 aa)
   
 
  0.961
PP1S78_211V6.1
Predicted protein (440 aa)
     
  0.958
PP1S88_62V6.1
Predicted protein (930 aa)
   
   
  0.945
PP1S88_58V6.1
Homoserine dehydrogenase (371 aa)
   
   
  0.945
PP1S194_198V6.1
Predicted protein (924 aa)
   
   
  0.945
PP1S169_77V6.1
annotation not available (652 aa)
   
   
  0.945
PP1S102_20V6.1
Predicted protein (383 aa)
     
  0.929
PP1S4335_1V6.1
Aspartokinase ; Belongs to the aspartokinase family (217 aa)
   
 
  0.833
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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