• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S9_30V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S9_30V6.2" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S9_30V6.2annotation not available (480 aa)    
Predicted Functional Partners:
PP1S16_46V6.1
annotation not available (462 aa)
     
   
  0.616
PP1S249_66V6.1
Predicted protein (152 aa)
           
  0.569
PP1S105_45V6.1
Predicted protein (590 aa)
           
  0.524
PP1S88_88V6.1
annotation not available (614 aa)
           
  0.520
PP1S25_265V6.1
annotation not available (563 aa)
           
  0.520
PP1S15_89V6.2
annotation not available (646 aa)
           
  0.520
PP1S7_434V6.3
annotation not available (536 aa)
           
  0.504
PP1S171_139V6.1
Predicted protein (553 aa)
           
  0.504
PP1S128_55V6.1
annotation not available (643 aa)
           
  0.504
PP1S68_274V6.1
Predicted protein (392 aa)
     
   
  0.492
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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