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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S9_331V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S9_331V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S9_331V6.1annotation not available (347 aa)    
Predicted Functional Partners:
PP1S199_2V6.1
Predicted protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family (653 aa)
     
 
  0.968
PP1S373_37V6.1
annotation not available (323 aa)
     
 
  0.959
PP1S9_169V6.1
annotation not available (284 aa)
         
  0.957
PP1S212_1V6.1
Predicted protein (303 aa)
         
  0.957
PP1S68_185V6.1
Predicted protein (327 aa)
         
  0.955
PP1S157_51V6.3
Predicted protein (269 aa)
         
  0.955
POR1
Predicted protein; Protochlorophyllide reductase chloroplast (402 aa)
         
  0.953
POR2
Uncharacterized protein (406 aa)
         
  0.953
PP1S125_47V6.1
Predicted protein (451 aa)
     
 
  0.950
PP1S5_30V6.1
Predicted protein (394 aa)
     
 
  0.929
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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