STRINGSTRING
PP1S9_378V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S9_378V6.1" - Annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S9_378V6.1Annotation not available (128 aa)    
Predicted Functional Partners:
PP1S115_80V6.1
Predicted protein (377 aa)
       
  0.632
PP1S7_102V6.1
Predicted protein; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (1712 aa)
       
    0.597
PP1S452_30V6.1
Clathrin heavy chain ; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (1749 aa)
       
    0.597
PP1S270_53V6.1
Predicted protein; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (1693 aa)
       
    0.597
PP1S147_10V6.1
Predicted protein; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (1709 aa)
       
    0.597
VAMP72B3
R-SNARE, VAMP72-family (238 aa)
         
  0.550
VAMP71A3
R-SNARE, VAMP71-family (220 aa)
         
  0.550
VAMP72A2
R-SNARE, VAMP72-family (220 aa)
         
  0.550
VAMP72B2
R-SNARE, VAMP72-family (239 aa)
         
  0.550
VAMP71A1
R-SNARE, VAMP71-family (220 aa)
         
  0.550
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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