STRINGSTRING
PP1S9_402V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S9_402V6.2" - Annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S9_402V6.2Annotation not available (417 aa)    
Predicted Functional Partners:
PP1S64_184V6.1
Predicted protein (291 aa)
     
   
  0.472
PP1S99_32V6.1
Predicted protein (940 aa)
           
  0.470
PP1S31_162V6.1
Predicted protein (710 aa)
           
  0.470
PP1S198_35V6.1
Predicted protein (743 aa)
           
  0.470
PP1S130_270V6.1
Predicted protein (766 aa)
           
  0.470
PP1S80_118V6.1
Predicted protein (174 aa)
           
  0.463
PP1S219_67V6.1
Predicted protein (355 aa)
           
  0.463
PP1S142_6V6.1
Predicted protein (347 aa)
           
  0.463
PP1S92_14V6.1
Predicted protein; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium (1074 aa)
       
      0.420
PCA1
Predicted protein; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium (1098 aa)
       
      0.420
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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