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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S9_430V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S9_430V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S9_430V6.1annotation not available (901 aa)    
Predicted Functional Partners:
PP1S79_134V6.1
Predicted protein (495 aa)
     
   
  0.585
PP1S80_155V6.1
annotation not available (536 aa)
     
   
  0.579
PP1S47_196V6.1
Predicted protein (641 aa)
           
  0.579
PP1S31_360V6.1
Patatin; Lipolytic acyl hydrolase (LAH) (417 aa)
       
 
  0.559
PP1S30_296V6.1
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family (291 aa)
   
 
  0.545
PP1S120_101V6.1
Predicted protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family (287 aa)
   
 
  0.545
PP1S563_4V6.1
Predicted protein (1226 aa)
   
   
  0.535
PP1S42_235V6.1
Predicted protein (917 aa)
   
   
  0.535
PP1S31_387V6.1
Predicted protein (894 aa)
   
   
  0.535
PP1S246_77V6.1
Predicted protein (421 aa)
     
 
  0.533
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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