STRINGSTRING
PP1S9_453V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S9_453V6.1" - Annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S9_453V6.1Annotation not available (510 aa)    
Predicted Functional Partners:
PP1S80_186V6.2
Predicted protein (404 aa)
     
 
  0.903
PP1S323_18V6.1
Predicted protein (479 aa)
     
 
    0.902
PP1S114_190V6.1
Predicted protein (476 aa)
     
 
    0.902
PP1S72_209V6.1
Predicted protein (383 aa)
     
 
  0.902
PP1S14_62V6.1
Annotation not available (420 aa)
     
 
  0.902
PP1S165_30V6.1
Predicted protein (372 aa)
         
  0.901
PP1S13_388V6.1
Predicted protein (639 aa)
         
  0.901
PP1S99_87V6.1
Predicted protein (447 aa)
     
 
    0.900
PP1S139_10V6.1
Predicted protein (555 aa)
     
 
    0.900
PP1S99_117V6.1
Predicted protein (350 aa)
         
    0.900
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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