• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S9_64V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S9_64V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S9_64V6.1annotation not available (440 aa)    
Predicted Functional Partners:
cpk18
Cpk18 calcium-dependent protein kinase (589 aa)
   
      0.442
cpk15
Cpk15 calcium-dependent protein kinase (527 aa)
   
      0.438
cpk14
Cpk14 calcium-dependent protein kinase (525 aa)
   
      0.437
PP1S88_186V6.1
Predicted protein (1189 aa)
   
 
  0.423
PP1S81_123V6.1
Predicted protein (1194 aa)
   
 
  0.423
PP1S87_126V6.1
annotation not available (417 aa)
   
 
      0.423
PP1S86_95V6.1
Predicted protein (493 aa)
   
 
      0.417
cpk1
Cpk1 calcium-dependent protein kinase (549 aa)
   
      0.408
PP1S68_168V6.1
annotation not available (217 aa)
   
      0.406
PP1S66_253V6.1
Predicted protein (468 aa)
   
 
      0.404
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (15%) [HD]