STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PICST_65392Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex. (233 aa)    
Predicted Functional Partners:
SLY1
Vesicle trafficking protein Sly1 (Sec1 family); Belongs to the STXBP/unc-18/SEC1 family.
    
 0.999
PICST_35101
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
   
 0.999
PICST_44918
t-SNARE coiled-coil homology domain-containing protein.
   
 0.999
SED5
SNARE protein SED5/Syntaxin 5; Belongs to the syntaxin family.
   
 0.999
PICST_64252
Transport protein; Belongs to the synaptobrevin family.
    
 0.999
PICST_65879
Uncharacterized protein; Belongs to the synaptobrevin family.
   
 0.993
PICST_48995
Uncharacterized protein.
   
 0.986
PICST_64082
Uncharacterized protein.
    
 0.859
SEC18
Cytoplasmic protein involved in protein transport between ER and Golgi ATPase.
    
 0.824
YPT1
GTP-binding protein of the rab family.
   
 0.822
Your Current Organism:
Scheffersomyces stipitis
NCBI taxonomy Id: 322104
Other names: Pichia stipitis CBS 6054, S. stipitis CBS 6054, Scheffersomyces stipitis CBS 6054
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