CTK1 protein (Scheffersomyces stipitis) - STRING interaction network

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Score

CTK1

Kinase of RNA polymerase II carboxy-terminal domain (CTD), alpha subunit. (590 aa)

Predicted Functional Partners:

CTK2

0.989

CTK3

0.977

RPO21

0.953

PICST_60868

0.942

PICST_70551

0.874

PICST_63097

0.761

PICST_40336

0.731

KIN28

0.728

PICST_82497

0.717

RPB3

0.696

Your Current Organism:

Scheffersomyces stipitis

NCBI taxonomy Id: 322104
Other names: Pichia stipitis CBS 6054, S. stipitis CBS 6054, Scheffersomyces stipitis CBS 6054

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CTK1	CTK2	A3LUH2	A3LXF5	Kinase of RNA polymerase II carboxy-terminal domain (CTD), alpha subunit.	RNA polymerase II C-terminal domain kinase beta subunit; Belongs to the cyclin family.	0.989
CTK1	CTK3	A3LUH2	A3LWA0	Kinase of RNA polymerase II carboxy-terminal domain (CTD), alpha subunit.	CTD kinase-I gamma subunit.	0.977
CTK1	KIN28	A3LUH2	A3LNM7	Kinase of RNA polymerase II carboxy-terminal domain (CTD), alpha subunit.	Serine-threonine kinase, subunit of RNA Pol TFIIK; Belongs to the protein kinase superfamily.	0.728
CTK1	PICST_40336	A3LUH2	A3LNS8	Kinase of RNA polymerase II carboxy-terminal domain (CTD), alpha subunit.	Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	0.731
CTK1	PICST_60868	A3LUH2	A3LVP2	Kinase of RNA polymerase II carboxy-terminal domain (CTD), alpha subunit.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.942
CTK1	PICST_63097	A3LUH2	A3LZK8	Kinase of RNA polymerase II carboxy-terminal domain (CTD), alpha subunit.	RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II.	0.761
CTK1	PICST_70551	A3LUH2	A3LN55	Kinase of RNA polymerase II carboxy-terminal domain (CTD), alpha subunit.	Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	0.874
CTK1	PICST_82497	A3LUH2	A3LRD0	Kinase of RNA polymerase II carboxy-terminal domain (CTD), alpha subunit.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.717
CTK1	RPB3	A3LUH2	A3GF98	Kinase of RNA polymerase II carboxy-terminal domain (CTD), alpha subunit.	45 kDa subunit of RNA polymerase II.	0.696
CTK1	RPO21	A3LUH2	A3GID7	Kinase of RNA polymerase II carboxy-terminal domain (CTD), alpha subunit.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.953
CTK2	CTK1	A3LXF5	A3LUH2	RNA polymerase II C-terminal domain kinase beta subunit; Belongs to the cyclin family.	Kinase of RNA polymerase II carboxy-terminal domain (CTD), alpha subunit.	0.989
CTK2	CTK3	A3LXF5	A3LWA0	RNA polymerase II C-terminal domain kinase beta subunit; Belongs to the cyclin family.	CTD kinase-I gamma subunit.	0.971
CTK2	KIN28	A3LXF5	A3LNM7	RNA polymerase II C-terminal domain kinase beta subunit; Belongs to the cyclin family.	Serine-threonine kinase, subunit of RNA Pol TFIIK; Belongs to the protein kinase superfamily.	0.721
CTK2	PICST_40336	A3LXF5	A3LNS8	RNA polymerase II C-terminal domain kinase beta subunit; Belongs to the cyclin family.	Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	0.734
CTK2	PICST_60868	A3LXF5	A3LVP2	RNA polymerase II C-terminal domain kinase beta subunit; Belongs to the cyclin family.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.768
CTK2	PICST_63097	A3LXF5	A3LZK8	RNA polymerase II C-terminal domain kinase beta subunit; Belongs to the cyclin family.	RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II.	0.686
CTK2	PICST_70551	A3LXF5	A3LN55	RNA polymerase II C-terminal domain kinase beta subunit; Belongs to the cyclin family.	Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	0.790
CTK2	PICST_82497	A3LXF5	A3LRD0	RNA polymerase II C-terminal domain kinase beta subunit; Belongs to the cyclin family.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.728
CTK2	RPB3	A3LXF5	A3GF98	RNA polymerase II C-terminal domain kinase beta subunit; Belongs to the cyclin family.	45 kDa subunit of RNA polymerase II.	0.632
CTK2	RPO21	A3LXF5	A3GID7	RNA polymerase II C-terminal domain kinase beta subunit; Belongs to the cyclin family.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.714