STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PICST_85060UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)    
Predicted Functional Partners:
PICST_56381
Ubiquitin-like domain-containing protein.
   
 0.999
UBA2
Ubiquitin-activating enzyme E1-like; Belongs to the ubiquitin-activating E1 family.
   
 0.999
PICST_81269
Uncharacterized protein.
   
 0.998
SIZ1
Uncharacterized protein.
    
 0.997
NUP4
Nuclear pore protein.
   
 0.996
NSP1
Nucleoporin NSP1 (Nuclear pore protein NSP1) (Nucleoskeletal-like protein) (P110).
    
 0.976
NSP2
Nucleoskeletal protein.
    
 0.976
PICST_51192
ThiF domain-containing protein.
  
 0.975
PICST_86017
DNA damage-responsive transcriptional repressor RPH1.
    
 0.974
PDR6
Member of the karyopherin-beta family.
   
 
 0.964
Your Current Organism:
Scheffersomyces stipitis
NCBI taxonomy Id: 322104
Other names: Pichia stipitis CBS 6054, S. stipitis CBS 6054, Scheffersomyces stipitis CBS 6054
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