STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1JUA0_TETURTPR_REGION domain-containing protein. (453 aa)    
Predicted Functional Partners:
T1JUJ2_TETUR
Histone acetyltransferase type B catalytic subunit.
   
 
 0.987
T1KX52_TETUR
Uncharacterized protein.
   
 
 0.967
T1L033_TETUR
WD_REPEATS_REGION domain-containing protein.
   
 
 0.954
T1JYV7_TETUR
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 
 0.921
T1K8J3_TETUR
Histone H3; Belongs to the histone H3 family.
   
 
 0.793
T1K942_TETUR
Histone domain-containing protein.
   
 
 0.793
T1KUB2_TETUR
Histone domain-containing protein.
   
 
 0.793
T1KGQ4_TETUR
TIR domain-containing protein.
   
 
 0.746
T1KNY7_TETUR
SLBP_RNA_bind domain-containing protein.
   
  
 0.662
T1K5R4_TETUR
Histone H2B; Belongs to the histone H2B family.
    
 
 0.653
Your Current Organism:
Tetranychus urticae
NCBI taxonomy Id: 32264
Other names: T. urticae, red spider mite, two-spotted spider mite, twospotted mite
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