T1K1Z9_TETUR protein (Tetranychus urticae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

T1K1Z9_TETUR

RING-type domain-containing protein. (313 aa)

Predicted Functional Partners:

T1JYQ0_TETUR

0.941

T1KXI7_TETUR

0.526

T1K1B5_TETUR

0.520

T1KYV8_TETUR

0.489

T1K0P5_TETUR

0.436

T1KQK5_TETUR

0.430

Your Current Organism:

Tetranychus urticae

NCBI taxonomy Id: 32264
Other names: T. urticae, red spider mite, two-spotted spider mite, twospotted mite

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T1JYQ0_TETUR	T1K1B5_TETUR	T1JYQ0	T1K1B5	RING-type domain-containing protein.	RING-CH-type domain-containing protein.	0.491
T1JYQ0_TETUR	T1K1Z9_TETUR	T1JYQ0	T1K1Z9	RING-type domain-containing protein.	RING-type domain-containing protein.	0.941
T1K0P5_TETUR	T1K1Z9_TETUR	T1K0P5	T1K1Z9	DUF2040 domain-containing protein.	RING-type domain-containing protein.	0.436
T1K1B5_TETUR	T1JYQ0_TETUR	T1K1B5	T1JYQ0	RING-CH-type domain-containing protein.	RING-type domain-containing protein.	0.491
T1K1B5_TETUR	T1K1Z9_TETUR	T1K1B5	T1K1Z9	RING-CH-type domain-containing protein.	RING-type domain-containing protein.	0.520
T1K1Z9_TETUR	T1JYQ0_TETUR	T1K1Z9	T1JYQ0	RING-type domain-containing protein.	RING-type domain-containing protein.	0.941
T1K1Z9_TETUR	T1K0P5_TETUR	T1K1Z9	T1K0P5	RING-type domain-containing protein.	DUF2040 domain-containing protein.	0.436
T1K1Z9_TETUR	T1K1B5_TETUR	T1K1Z9	T1K1B5	RING-type domain-containing protein.	RING-CH-type domain-containing protein.	0.520
T1K1Z9_TETUR	T1KQK5_TETUR	T1K1Z9	T1KQK5	RING-type domain-containing protein.	RING-type domain-containing protein.	0.430
T1K1Z9_TETUR	T1KXI7_TETUR	T1K1Z9	T1KXI7	RING-type domain-containing protein.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.526
T1K1Z9_TETUR	T1KYV8_TETUR	T1K1Z9	T1KYV8	RING-type domain-containing protein.	Fe2OG dioxygenase domain-containing protein.	0.489
T1KQK5_TETUR	T1K1Z9_TETUR	T1KQK5	T1K1Z9	RING-type domain-containing protein.	RING-type domain-containing protein.	0.430
T1KXI7_TETUR	T1K1Z9_TETUR	T1KXI7	T1K1Z9	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	RING-type domain-containing protein.	0.526
T1KYV8_TETUR	T1K1Z9_TETUR	T1KYV8	T1K1Z9	Fe2OG dioxygenase domain-containing protein.	RING-type domain-containing protein.	0.489