STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1K5S6_TETURUncharacterized protein; Belongs to the DEAD box helicase family. (714 aa)    
Predicted Functional Partners:
T1KD12_TETUR
MPN domain-containing protein.
   
 0.931
T1JSP0_TETUR
Tr-type G domain-containing protein.
   
 0.930
T1JUH2_TETUR
Uncharacterized protein.
   
 0.899
T1K8X8_TETUR
WD_REPEATS_REGION domain-containing protein.
    
 0.899
T1K8Q2_TETUR
Small nuclear ribonucleoprotein Sm D2.
   
 0.890
T1KZU6_TETUR
Small nuclear ribonucleoprotein Sm D3.
   
 0.888
T1JU61_TETUR
Sm domain-containing protein; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.875
T1KQK8_TETUR
Uncharacterized protein.
   
 0.870
T1K4R3_TETUR
U1 small nuclear ribonucleoprotein C; Component of the U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA; Belongs to the U1 small nuclear ribonucleoprotein C family.
    
 0.866
T1JXH8_TETUR
Uncharacterized protein.
   
 0.856
Your Current Organism:
Tetranychus urticae
NCBI taxonomy Id: 32264
Other names: T. urticae, red spider mite, two-spotted spider mite, twospotted mite
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.