STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1K759_TETURWD_REPEATS_REGION domain-containing protein. (300 aa)    
Predicted Functional Partners:
T1K7D5_TETUR
TRASH domain-containing protein.
   
 
 0.865
T1KUK0_TETUR
Brix domain-containing protein.
   
 
 0.801
T1KFK9_TETUR
60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.
   
 
 0.789
T1L303_TETUR
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.
  
 
 0.778
T1L2L1_TETUR
Uncharacterized protein.
   
   0.756
T1K1K8_TETUR
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
  
 0.740
T1JWJ6_TETUR
Protein MAK16 homolog; Belongs to the MAK16 family.
   
 
 0.729
T1JV80_TETUR
Brix domain-containing protein.
   
 
 0.725
T1KQY1_TETUR
RRM domain-containing protein.
   
 
 0.710
T1KBL3_TETUR
Uncharacterized protein.
   
    0.708
Your Current Organism:
Tetranychus urticae
NCBI taxonomy Id: 32264
Other names: T. urticae, red spider mite, two-spotted spider mite, twospotted mite
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