STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1KFR7_TETURProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (370 aa)    
Predicted Functional Partners:
T1JSB8_TETUR
Uncharacterized protein; Belongs to the cyclin family.
   
 0.925
T1KFP0_TETUR
Uncharacterized protein.
    
 0.866
T1KNP6_TETUR
Uncharacterized protein; Belongs to the cyclin family.
   
 0.848
T1K8K7_TETUR
Uncharacterized protein.
    
 0.776
T1K926_TETUR
AHD domain-containing protein.
    
 0.766
T1KTI7_TETUR
Transcription elongation factor SPT5.
    
 0.764
T1KY13_TETUR
Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
    
 
 0.757
T1KH13_TETUR
Cyclin N-terminal domain-containing protein.
   
 0.739
T1JYI1_TETUR
Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.
     
 0.679
T1K935_TETUR
Bin3-type SAM domain-containing protein.
    
 
 0.671
Your Current Organism:
Tetranychus urticae
NCBI taxonomy Id: 32264
Other names: T. urticae, red spider mite, two-spotted spider mite, twospotted mite
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