STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
algKAlginate biosynthetic protein AlgK. (457 aa)    
Predicted Functional Partners:
algX
Alginate biosynthesis protein AlgX.
 
 
 0.999
alg8
Alginate biosynthesis protein Alg8.
 
 
 0.997
algL
Alginate lyase; Catalyzes the depolymerization of alginate by cleaving the beta-1,4 glycosidic bond between two adjacent sugar residues via a beta-elimination mechanism. May serve to degrade mislocalized alginate that is trapped in the periplasmic space.
 
  
 0.995
alg44
Alginate biosynthesis protein Alg44.
  
  
 0.994
algV
Alginate biosynthesis protein AlgV.
 
 
 0.981
algI
Alginate O-acetyl transferase; Belongs to the membrane-bound acyltransferase family.
 
 
 0.960
algJ
Alginate biosynthesis outer membrane protein AlgJ.
  
  
 0.946
algG
Mannuronan C-5-Epimerase.
 
   
 0.945
algA
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.846
algF
Alginate biosynthesis protein.
  
  
 0.831
Your Current Organism:
Azotobacter vinelandii
NCBI taxonomy Id: 322710
Other names: A. vinelandii DJ, Azotobacter vinelandii DJ, Azotobacter vinelandii str. DJ, Azotobacter vinelandii strain DJ
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.