STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eexDType I secretion system ATPase. (580 aa)    
Predicted Functional Partners:
eexE
Type I secretion membrane fusion protein.
  
 0.967
eexF
Type I secretion outer membrane protein.
 
  
 0.877
algE1
Secreted mannuronan C-5 epimerase.
 
 
 0.741
algE7
Secreted bifunctional mannuronan C-5 epimerase/alginate lyase.
 
 
 0.602
algE6
Secreted mannuronan C-5 epimerase.
 
 
 0.594
algY
Secreted mannuronan C5-epimerase-like protein.
 
 
 0.586
algE4
Secreted mannuronan C-5 epimerase.
 
 
 0.585
ACO81206.1
Calcium-binding protein.
 
 
 0.579
alyA3
Alginate lyase.
 
 
 0.524
ACO79504.1
Hypothetical protein.
 
 
 0.521
Your Current Organism:
Azotobacter vinelandii
NCBI taxonomy Id: 322710
Other names: A. vinelandii DJ, Azotobacter vinelandii DJ, Azotobacter vinelandii str. DJ, Azotobacter vinelandii strain DJ
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.