STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACO78798.1Periplasmic binding protein/LacI transcriptional regulator protein. (308 aa)    
Predicted Functional Partners:
rbsA
ABC transporter; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.975
ACO80480.1
Bacterial inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 0.972
ACO80481.1
Bacterial inner-membrane translocator, araH family; Belongs to the binding-protein-dependent transport system permease family.
 0.971
ACO80483.1
Ribose ABC transporter.
  
  
 
0.929
ACO80484.1
Periplasmic sugar binding protein.
  
  
 
0.929
ACO81121.1
ABC transporter substrate binding protein.
  
  
 
0.904
ACO76661.1
Periplasmic sugar binding protein.
     
  0.900
ACO79936.1
Periplasmic sugar-binding protein.
     
  0.900
ACO81020.1
Periplasmic binding protein/LacI transcriptional regulator.
     
  0.900
ACO81240.1
Periplasmic sugar-binding protein.
     
  0.900
Your Current Organism:
Azotobacter vinelandii
NCBI taxonomy Id: 322710
Other names: A. vinelandii DJ, Azotobacter vinelandii DJ, Azotobacter vinelandii str. DJ, Azotobacter vinelandii strain DJ
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