STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nham_0825Hypothetical protein. (909 aa)    
Predicted Functional Partners:
Nham_0824
Conserved hypothetical protein.
 
     0.949
Nham_0822
Conserved hypothetical protein.
 
     0.947
Nham_0823
Hypothetical protein.
 
     0.946
Nham_0821
Conserved hypothetical protein.
 
     0.943
Nham_0820
Conserved hypothetical protein.
 
     0.906
Nham_0818
Conserved hypothetical protein.
 
     0.904
Nham_0819
Conserved hypothetical protein.
 
     0.904
Nham_0817
Conserved hypothetical protein.
 
     0.903
Nham_0827
AAA ATPase, central region.
 
     0.869
Nham_0828
Conserved hypothetical protein.
 
     0.869
Your Current Organism:
Nitrobacter hamburgensis
NCBI taxonomy Id: 323097
Other names: N. hamburgensis X14, Nitrobacter hamburgensis X14, Nitrobacter hamburgensis str. X14, Nitrobacter hamburgensis strain X14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.