STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nham_3122Molybdopterin-guanine dinucleotide biosynthesis protein A. (172 aa)    
Predicted Functional Partners:
Nham_3123
Conserved hypothetical protein.
 
    0.986
Nham_3119
Conserved hypothetical protein.
 
    0.954
Nham_3120
Hypothetical protein.
 
     0.952
Nham_3121
Conserved hypothetical protein.
 
     0.950
Nham_3118
4Fe-4S ferredoxin, iron-sulfur binding protein.
 
    0.914
Nham_3124
Cytoplasmic chaperone TorD.
 
    0.908
Nham_3127
4Fe-4S ferredoxin, iron-sulfur binding protein.
 
     0.876
Nham_3126
Twin-arginine translocation pathway signal; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
   
 0.875
Nham_3128
Formate dehydrogenase gamma subunit.
 
     0.861
fdhD
Formate dehydrogenase family accessory protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
 
 
 
 0.850
Your Current Organism:
Nitrobacter hamburgensis
NCBI taxonomy Id: 323097
Other names: N. hamburgensis X14, Nitrobacter hamburgensis X14, Nitrobacter hamburgensis str. X14, Nitrobacter hamburgensis strain X14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.