STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nham_4012Conserved hypothetical protein. (170 aa)    
Predicted Functional Partners:
Nham_3193
Conserved hypothetical protein.
  
     0.768
Nham_1661
Hpt protein.
  
     0.699
Nham_0689
Flagellar export protein.
  
     0.676
Nham_2660
Conserved hypothetical protein.
  
     0.676
Nham_1660
Conserved hypothetical protein.
  
     0.668
Nham_1389
Tetratricopeptide TPR_4 protein.
  
     0.633
Nham_4011
Protein of unknown function DUF159; Belongs to the SOS response-associated peptidase family.
       0.609
Nham_1345
Putative flagellar assembly protein.
  
     0.562
Nham_0494
Conserved hypothetical protein.
  
     0.551
Nham_1313
Conserved hypothetical protein.
  
     0.539
Your Current Organism:
Nitrobacter hamburgensis
NCBI taxonomy Id: 323097
Other names: N. hamburgensis X14, Nitrobacter hamburgensis X14, Nitrobacter hamburgensis str. X14, Nitrobacter hamburgensis strain X14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.