Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Nwi_0029 | katG | Nwi_0029 | Nwi_0030 | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Heme catalase/peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. | 0.519 |
Nwi_0031 | katG | Nwi_0031 | Nwi_0030 | Glutathione S-transferase. | Heme catalase/peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. | 0.509 |
Nwi_0051 | Nwi_0891 | Nwi_0051 | Nwi_0891 | Thioredoxin; Belongs to the thioredoxin family. | 1-Cys peroxiredoxin. | 0.454 |
Nwi_0051 | katG | Nwi_0051 | Nwi_0030 | Thioredoxin; Belongs to the thioredoxin family. | Heme catalase/peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. | 0.406 |
Nwi_0285 | Nwi_1102 | Nwi_0285 | Nwi_1102 | Prephenate dehydratase. | Pyridoxal-dependent decarboxylase. | 0.805 |
Nwi_0285 | Nwi_2295 | Nwi_0285 | Nwi_2295 | Prephenate dehydratase. | GCN5-related N-acetyltransferase. | 0.800 |
Nwi_0285 | Nwi_2980 | Nwi_0285 | Nwi_2980 | Prephenate dehydratase. | Aminotransferase. | 0.989 |
Nwi_0285 | hisC | Nwi_0285 | Nwi_0583 | Prephenate dehydratase. | Histidinol phosphate aminotransferase apoenzyme; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.944 |
Nwi_0285 | katG | Nwi_0285 | Nwi_0030 | Prephenate dehydratase. | Heme catalase/peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. | 0.800 |
Nwi_0891 | Nwi_0051 | Nwi_0891 | Nwi_0051 | 1-Cys peroxiredoxin. | Thioredoxin; Belongs to the thioredoxin family. | 0.454 |
Nwi_0891 | katG | Nwi_0891 | Nwi_0030 | 1-Cys peroxiredoxin. | Heme catalase/peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. | 0.439 |
Nwi_1102 | Nwi_0285 | Nwi_1102 | Nwi_0285 | Pyridoxal-dependent decarboxylase. | Prephenate dehydratase. | 0.805 |
Nwi_1102 | Nwi_2295 | Nwi_1102 | Nwi_2295 | Pyridoxal-dependent decarboxylase. | GCN5-related N-acetyltransferase. | 0.906 |
Nwi_1102 | Nwi_2980 | Nwi_1102 | Nwi_2980 | Pyridoxal-dependent decarboxylase. | Aminotransferase. | 0.906 |
Nwi_1102 | hisC | Nwi_1102 | Nwi_0583 | Pyridoxal-dependent decarboxylase. | Histidinol phosphate aminotransferase apoenzyme; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.903 |
Nwi_1102 | katG | Nwi_1102 | Nwi_0030 | Pyridoxal-dependent decarboxylase. | Heme catalase/peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. | 0.900 |
Nwi_2295 | Nwi_0285 | Nwi_2295 | Nwi_0285 | GCN5-related N-acetyltransferase. | Prephenate dehydratase. | 0.800 |
Nwi_2295 | Nwi_1102 | Nwi_2295 | Nwi_1102 | GCN5-related N-acetyltransferase. | Pyridoxal-dependent decarboxylase. | 0.906 |
Nwi_2295 | Nwi_2980 | Nwi_2295 | Nwi_2980 | GCN5-related N-acetyltransferase. | Aminotransferase. | 0.900 |
Nwi_2295 | hisC | Nwi_2295 | Nwi_0583 | GCN5-related N-acetyltransferase. | Histidinol phosphate aminotransferase apoenzyme; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.900 |
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