STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nwi_0248Conserved hypothetical protein; Belongs to the UPF0262 family. (167 aa)    
Predicted Functional Partners:
Nwi_0249
Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
     0.902
Nwi_1303
Protein of unknown function DUF1476.
  
     0.686
Nwi_2356
Protein related to arylsulfate sulfotransferase involved in siderophore biosynthesis.
  
     0.661
Nwi_0738
Conserved hypothetical protein.
  
     0.575
Nwi_0767
Protein of unknown function DUF983.
 
     0.571
Nwi_1714
Protein of unknown function DUF983.
 
     0.561
Nwi_2738
Thiamine monophosphate synthase.
  
     0.517
Nwi_1508
Hemimethylated DNA-binding region.
  
     0.508
Nwi_0325
Conserved hypothetical protein.
  
     0.505
Nwi_0404
Cobaltochelatase CobT subunit.
  
     0.498
Your Current Organism:
Nitrobacter winogradskyi
NCBI taxonomy Id: 323098
Other names: N. winogradskyi Nb-255, Nitrobacter winogradskyi Nb-255, Nitrobacter winogradskyi str. Nb-255, Nitrobacter winogradskyi strain Nb-255
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