Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Nwi_0464 | Nwi_2008 | Nwi_0464 | Nwi_2008 | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | Dihydroorotase. | 0.986 |
Nwi_0464 | Nwi_2703 | Nwi_0464 | Nwi_2703 | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | Dihydroorotase multifunctional complex type. | 0.985 |
Nwi_0464 | carA | Nwi_0464 | Nwi_2446 | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.952 |
Nwi_0464 | carB | Nwi_0464 | Nwi_2449 | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.962 |
Nwi_0464 | pyrB | Nwi_0464 | Nwi_2007 | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.949 |
Nwi_0464 | pyrE | Nwi_0464 | Nwi_0153 | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.993 |
Nwi_0464 | pyrF | Nwi_0464 | Nwi_1862 | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.932 |
Nwi_1452 | pyrF | Nwi_1452 | Nwi_1862 | MazG nucleotide pyrophosphohydrolase. | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.900 |
Nwi_1452 | pyrH | Nwi_1452 | Nwi_1857 | MazG nucleotide pyrophosphohydrolase. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.900 |
Nwi_1452 | surE | Nwi_1452 | Nwi_1775 | MazG nucleotide pyrophosphohydrolase. | 3'-nucleotidase / 5'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.901 |
Nwi_2008 | Nwi_0464 | Nwi_2008 | Nwi_0464 | Dihydroorotase. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.986 |
Nwi_2008 | Nwi_2703 | Nwi_2008 | Nwi_2703 | Dihydroorotase. | Dihydroorotase multifunctional complex type. | 0.926 |
Nwi_2008 | carA | Nwi_2008 | Nwi_2446 | Dihydroorotase. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.934 |
Nwi_2008 | carB | Nwi_2008 | Nwi_2449 | Dihydroorotase. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.947 |
Nwi_2008 | pyrB | Nwi_2008 | Nwi_2007 | Dihydroorotase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.999 |
Nwi_2008 | pyrE | Nwi_2008 | Nwi_0153 | Dihydroorotase. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.841 |
Nwi_2008 | pyrF | Nwi_2008 | Nwi_1862 | Dihydroorotase. | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.867 |
Nwi_2703 | Nwi_0464 | Nwi_2703 | Nwi_0464 | Dihydroorotase multifunctional complex type. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.985 |
Nwi_2703 | Nwi_2008 | Nwi_2703 | Nwi_2008 | Dihydroorotase multifunctional complex type. | Dihydroorotase. | 0.926 |
Nwi_2703 | carA | Nwi_2703 | Nwi_2446 | Dihydroorotase multifunctional complex type. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.986 |
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