Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Nwi_0259 | Nwi_0611 | Nwi_0259 | Nwi_0611 | Hypothetical protein. | ABC transporter, transmembrane region. | 0.805 |
Nwi_0259 | Nwi_0635 | Nwi_0259 | Nwi_0635 | Hypothetical protein. | Histone deacetylase superfamily. | 0.935 |
Nwi_0259 | Nwi_2361 | Nwi_0259 | Nwi_2361 | Hypothetical protein. | ABC transporter, ATPase subunit. | 0.519 |
Nwi_0259 | Nwi_2927 | Nwi_0259 | Nwi_2927 | Hypothetical protein. | CbbX like protein. | 0.861 |
Nwi_0259 | dnaK | Nwi_0259 | Nwi_0197 | Hypothetical protein. | Heat shock protein Hsp70; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.625 |
Nwi_0259 | ndvA | Nwi_0259 | Nwi_2681 | Hypothetical protein. | Glucan exporter ATP-binding protein; Involved in beta-(1-->2)glucan export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation (By similarity). | 0.498 |
Nwi_0535 | ndvA | Nwi_0535 | Nwi_2681 | ABC transporter, transmembrane region. | Glucan exporter ATP-binding protein; Involved in beta-(1-->2)glucan export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation (By similarity). | 0.740 |
Nwi_0611 | Nwi_0259 | Nwi_0611 | Nwi_0259 | ABC transporter, transmembrane region. | Hypothetical protein. | 0.805 |
Nwi_0611 | Nwi_1412 | Nwi_0611 | Nwi_1412 | ABC transporter, transmembrane region. | Sugar transferase. | 0.473 |
Nwi_0611 | adk | Nwi_0611 | Nwi_1385 | ABC transporter, transmembrane region. | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | 0.481 |
Nwi_0611 | dnaK | Nwi_0611 | Nwi_0197 | ABC transporter, transmembrane region. | Heat shock protein Hsp70; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.714 |
Nwi_0611 | ndvA | Nwi_0611 | Nwi_2681 | ABC transporter, transmembrane region. | Glucan exporter ATP-binding protein; Involved in beta-(1-->2)glucan export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation (By similarity). | 0.812 |
Nwi_0635 | Nwi_0259 | Nwi_0635 | Nwi_0259 | Histone deacetylase superfamily. | Hypothetical protein. | 0.935 |
Nwi_0635 | Nwi_2927 | Nwi_0635 | Nwi_2927 | Histone deacetylase superfamily. | CbbX like protein. | 0.863 |
Nwi_0635 | ndvA | Nwi_0635 | Nwi_2681 | Histone deacetylase superfamily. | Glucan exporter ATP-binding protein; Involved in beta-(1-->2)glucan export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation (By similarity). | 0.457 |
Nwi_1233 | dnaK | Nwi_1233 | Nwi_0197 | ABC transporter, transmembrane region. | Heat shock protein Hsp70; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.439 |
Nwi_1233 | ndvA | Nwi_1233 | Nwi_2681 | ABC transporter, transmembrane region. | Glucan exporter ATP-binding protein; Involved in beta-(1-->2)glucan export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation (By similarity). | 0.692 |
Nwi_1412 | Nwi_0611 | Nwi_1412 | Nwi_0611 | Sugar transferase. | ABC transporter, transmembrane region. | 0.473 |
Nwi_1412 | ndvA | Nwi_1412 | Nwi_2681 | Sugar transferase. | Glucan exporter ATP-binding protein; Involved in beta-(1-->2)glucan export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation (By similarity). | 0.498 |
Nwi_2361 | Nwi_0259 | Nwi_2361 | Nwi_0259 | ABC transporter, ATPase subunit. | Hypothetical protein. | 0.519 |
page 1 of 3