STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nwi_2831Conserved hypothetical protein. (111 aa)    
Predicted Functional Partners:
Nwi_2830
Hypothetical protein.
 
     0.937
Nwi_2829
Hypothetical protein.
 
     0.935
Nwi_2825
Hypothetical protein.
 
     0.839
Nwi_0808
Phage portal protein, lambda.
 
    0.834
Nwi_2826
Conserved hypothetical protein.
 
     0.828
Nwi_0807
Peptidase U35, phage prohead HK97.
 
    0.820
Nwi_0810
Phage terminase GpA.
 
    0.787
Nwi_0809
Hypothetical protein.
 
     0.777
Nwi_0801
Hypothetical protein.
 
     0.758
Nwi_0802
Hypothetical protein.
 
     0.756
Your Current Organism:
Nitrobacter winogradskyi
NCBI taxonomy Id: 323098
Other names: N. winogradskyi Nb-255, Nitrobacter winogradskyi Nb-255, Nitrobacter winogradskyi str. Nb-255, Nitrobacter winogradskyi strain Nb-255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.