STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mhun_0016Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor. (1009 aa)    
Predicted Functional Partners:
cheD
CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
 
 0.965
Mhun_2550
CheW protein.
 
 0.929
Mhun_0898
CheW protein.
 
 0.926
Mhun_0110
CheA signal transduction histidine kinases.
 
 
 0.924
Mhun_1925
CheW protein.
 
 0.924
Mhun_0003
CheW protein.
 
 0.923
Mhun_1423
CheW protein.
 
 0.923
Mhun_0007
CheW protein.
 
 0.921
Mhun_2399
CheW protein.
 
 0.920
Mhun_0496
CheW protein.
 
 0.918
Your Current Organism:
Methanospirillum hungatei
NCBI taxonomy Id: 323259
Other names: M. hungatei JF-1, Methanospirillum hungatei DSM 864, Methanospirillum hungatei JF-1, Methanospirillum hungatei NBRC 100397, Methanospirillum hungatei str. JF-1, Methanospirillum hungatei strain JF-1
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