STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mhun_2035Putative PAS/PAC sensor protein. (468 aa)    
Predicted Functional Partners:
Mhun_1438
Putative PAS/PAC sensor protein.
  
 
 0.691
Mhun_0159
Response regulator receiver domain protein (CheY-like).
  
 
 0.680
Mhun_0886
Response regulator receiver domain protein (CheY-like).
  
 
 0.680
Mhun_0953
Response regulator receiver domain protein (CheY-like).
  
 
 0.680
Mhun_3201
Response regulator receiver domain protein (CheY-like).
  
 
 0.680
Mhun_2033
Hypothetical protein.
       0.552
Mhun_2034
Conserved hypothetical protein.
       0.552
pcn
Monomeric archaeal DNA polymerase sliding clamp; Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication. Belongs to the PCNA family.
  
  
 0.538
Mhun_1290
Response regulator receiver domain protein (CheY-like).
 
 
 0.528
Mhun_1415
Multi-sensor signal transduction histidine kinase.
 
 
 
 0.509
Your Current Organism:
Methanospirillum hungatei
NCBI taxonomy Id: 323259
Other names: M. hungatei JF-1, Methanospirillum hungatei DSM 864, Methanospirillum hungatei JF-1, Methanospirillum hungatei NBRC 100397, Methanospirillum hungatei str. JF-1, Methanospirillum hungatei strain JF-1
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