Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Noc_0268 | Noc_0990 | Noc_0268 | Noc_0990 | Transketolase. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.992 |
Noc_0268 | Noc_1582 | Noc_0268 | Noc_1582 | Transketolase. | Allosteric NADP-dependent malic enzyme; Phosphate acetyltransferase. | 0.960 |
Noc_0268 | Noc_2804 | Noc_0268 | Noc_2804 | Transketolase. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. | 0.991 |
Noc_0268 | eno | Noc_0268 | Noc_0852 | Transketolase. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis. | 0.982 |
Noc_0268 | pfp | Noc_0268 | Noc_2846 | Transketolase. | Pyrophosphate-dependent phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions. | 0.950 |
Noc_0268 | pgi | Noc_0268 | Noc_0903 | Transketolase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.992 |
Noc_0268 | rplB | Noc_0268 | Noc_2321 | Transketolase. | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.768 |
Noc_0268 | rpsB | Noc_0268 | Noc_0808 | Transketolase. | SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. | 0.857 |
Noc_0268 | tal-2 | Noc_0268 | Noc_2057 | Transketolase. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily. | 0.999 |
Noc_0990 | Noc_0268 | Noc_0990 | Noc_0268 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Transketolase. | 0.992 |
Noc_0990 | Noc_1582 | Noc_0990 | Noc_1582 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Allosteric NADP-dependent malic enzyme; Phosphate acetyltransferase. | 0.989 |
Noc_0990 | Noc_2804 | Noc_0990 | Noc_2804 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. | 0.969 |
Noc_0990 | eno | Noc_0990 | Noc_0852 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis. | 0.998 |
Noc_0990 | pfp | Noc_0990 | Noc_2846 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Pyrophosphate-dependent phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions. | 0.996 |
Noc_0990 | pgi | Noc_0990 | Noc_0903 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.995 |
Noc_0990 | rplB | Noc_0990 | Noc_2321 | Pyruvate kinase; Belongs to the pyruvate kinase family. | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.964 |
Noc_0990 | rpsB | Noc_0990 | Noc_0808 | Pyruvate kinase; Belongs to the pyruvate kinase family. | SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. | 0.966 |
Noc_0990 | rpsC | Noc_0990 | Noc_2318 | Pyruvate kinase; Belongs to the pyruvate kinase family. | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.964 |
Noc_0990 | tal-2 | Noc_0990 | Noc_2057 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily. | 0.999 |
Noc_1582 | Noc_0268 | Noc_1582 | Noc_0268 | Allosteric NADP-dependent malic enzyme; Phosphate acetyltransferase. | Transketolase. | 0.960 |
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