Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABB73636.1 | ABB73637.1 | Nmul_A0328 | Nmul_A0329 | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). | CheW protein. | 0.776 |
ABB73636.1 | ABB73638.1 | Nmul_A0328 | Nmul_A0330 | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). | MCP methyltransferase, CheR-type. | 0.725 |
ABB73636.1 | ABB73639.1 | Nmul_A0328 | Nmul_A0331 | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). | CheW protein. | 0.776 |
ABB73636.1 | ABB73640.1 | Nmul_A0328 | Nmul_A0332 | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). | Methyl-accepting chemotaxis sensory transducer. | 0.844 |
ABB73636.1 | ABB73641.1 | Nmul_A0328 | Nmul_A0333 | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). | CheA signal transduction histidine kinase. | 0.970 |
ABB73636.1 | ABB73643.1 | Nmul_A0328 | Nmul_A0335 | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). | Response regulator receiver modulated diguanylate cyclase/phosphodiesterase. | 0.987 |
ABB73636.1 | ABB74441.1 | Nmul_A0328 | Nmul_A1138 | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein; Response regulator receiver (CheY-like) modulated diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s). | 0.994 |
ABB73636.1 | ABB75588.1 | Nmul_A0328 | Nmul_A2297 | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). | Response regulator receiver modulated diguanylate cyclase/phosphodiesterase. | 0.996 |
ABB73636.1 | ABB75981.1 | Nmul_A0328 | Nmul_A2694 | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). | Multi-sensor hybrid histidine kinase. | 0.997 |
ABB73636.1 | cheB | Nmul_A0328 | Nmul_A0334 | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). | Response regulator receiver (CheY-like) modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.780 |
ABB73637.1 | ABB73636.1 | Nmul_A0329 | Nmul_A0328 | CheW protein. | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). | 0.776 |
ABB73637.1 | ABB73638.1 | Nmul_A0329 | Nmul_A0330 | CheW protein. | MCP methyltransferase, CheR-type. | 0.990 |
ABB73637.1 | ABB73639.1 | Nmul_A0329 | Nmul_A0331 | CheW protein. | CheW protein. | 0.971 |
ABB73637.1 | ABB73640.1 | Nmul_A0329 | Nmul_A0332 | CheW protein. | Methyl-accepting chemotaxis sensory transducer. | 0.992 |
ABB73637.1 | ABB73641.1 | Nmul_A0329 | Nmul_A0333 | CheW protein. | CheA signal transduction histidine kinase. | 0.999 |
ABB73637.1 | ABB73643.1 | Nmul_A0329 | Nmul_A0335 | CheW protein. | Response regulator receiver modulated diguanylate cyclase/phosphodiesterase. | 0.760 |
ABB73637.1 | ABB74441.1 | Nmul_A0329 | Nmul_A1138 | CheW protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein; Response regulator receiver (CheY-like) modulated diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s). | 0.824 |
ABB73637.1 | ABB75588.1 | Nmul_A0329 | Nmul_A2297 | CheW protein. | Response regulator receiver modulated diguanylate cyclase/phosphodiesterase. | 0.914 |
ABB73637.1 | ABB75981.1 | Nmul_A0329 | Nmul_A2694 | CheW protein. | Multi-sensor hybrid histidine kinase. | 0.895 |
ABB73637.1 | cheB | Nmul_A0329 | Nmul_A0334 | CheW protein. | Response regulator receiver (CheY-like) modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.997 |
page 1 of 6