STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS99426.1Alpha-galactosidase; KEGG: swd:Swoo_3656 hypothetical protein. (594 aa)    
Predicted Functional Partners:
ACT04171.1
KEGG: dat:HRM2_08770 GGDEF domain protein (selenocysteine protein).
  
    0.674
ACS99843.1
Hypothetical protein; KEGG: sus:Acid_2625 PA14 domain-containing protein.
  
     0.653
ACS98877.1
PFAM: S-layer domain protein; KEGG: lch:Lcho_3430 filamentous haemagglutinin outer membrane protein.
  
 
 0.595
ACT00434.1
PFAM: coagulation factor 5/8 type domain protein; KEGG: sus:Acid_1398 coagulation factor 5/8 type domain-containing protein.
  
    0.540
ACS99844.1
PFAM: S-layer domain protein; SMART: Parallel beta-helix repeat; KEGG: hypothetical protein.
  
   
 0.521
ACS99425.1
PFAM: extracellular solute-binding protein family 1; KEGG: bsu:BSU30160 hypothetical protein.
       0.520
ACS98874.1
PFAM: coagulation factor 5/8 type domain protein; KEGG: hypothetical protein.
  
     0.484
ACT03846.1
Alpha-L-fucosidase; KEGG: xfm:Xfasm12_0086 alpha-L-fucosidase.
  
    0.471
ACS99969.1
PFAM: Carbohydrate binding family 6; KEGG: hypothetical protein.
  
     0.463
ACT03667.1
PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: hypothetical protein.
 
    0.461
Your Current Organism:
Paenibacillus sp. JDR2
NCBI taxonomy Id: 324057
Other names: P. sp. JDR-2, Paenibacillus sp. JDR-2
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.