STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS99503.1PFAM: glycoside hydrolase family 16; S-layer domain protein; Carbohydrate-binding CenC domain protein; protein of unknown function DUF1533; coagulation factor 5/8 type domain protein; SMART: coagulation factor 5/8 type domain protein; KEGG: hypothetical protein. (2908 aa)    
Predicted Functional Partners:
ACS99502.1
PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH1064 hypothetical protein.
       0.487
ACS99157.1
Glucan endo-1,6-beta-glucosidase; PFAM: glycoside hydrolase family 30; KEGG: sde:Sde_2992 helix-turn-helix, AraC type; Belongs to the glycosyl hydrolase 30 family.
 
   
 0.464
ACS99156.1
Glucan endo-1,6-beta-glucosidase; PFAM: glycoside hydrolase family 30; KEGG: rfr:Rfer_1106 glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 30 family.
 
   
 0.454
ACT01596.1
PFAM: protein of unknown function DUF606; KEGG: kpe:KPK_2583 hypothetical protein.
  
     0.435
ACT03334.1
PFAM: S-layer domain protein; KEGG: hypothetical protein.
  
   
 0.431
ACT00189.1
Hypothetical protein.
  
     0.401
Your Current Organism:
Paenibacillus sp. JDR2
NCBI taxonomy Id: 324057
Other names: P. sp. JDR-2, Paenibacillus sp. JDR-2
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