STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACT00658.1Hypothetical protein. (268 aa)    
Predicted Functional Partners:
ACT00660.1
Two component transcriptional regulator, AraC family; PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: hypothetical protein.
  
    0.562
ACT00659.1
Putative sensor with HAMP domain; PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; KEGG: bha:BH3447 two-component sensor histidine kinase.
      0.496
ACT00657.1
Xylan 1,4-beta-xylosidase; PFAM: glycoside hydrolase family 3 domain protein; cellulosome anchoring protein cohesin region; KEGG: pin:Ping_0139 glycoside hydrolase family 3 protein.
       0.479
ACT00661.1
PFAM: extracellular solute-binding protein family 1; KEGG: bcs:BCAN_B0755 extracellular solute-binding protein.
       0.424
Your Current Organism:
Paenibacillus sp. JDR2
NCBI taxonomy Id: 324057
Other names: P. sp. JDR-2, Paenibacillus sp. JDR-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.