STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACT00946.1PFAM: protein of unknown function DUF441; KEGG: eum:ECUMN_2078 conserved hypothetical protein; putative inner membrane protein. (153 aa)    
Predicted Functional Partners:
ACT00948.1
PFAM: (2R)-phospho-3-sulfolactate synthase ComA; KEGG: xau:Xaut_4872 phosphosulfolactate synthase.
 
     0.873
ACT00949.1
KEGG: bsu:BSU24440 hypothetical protein.
 
     0.845
comB
PFAM: 2-phosphosulfolactate phosphatase; KEGG: cbs:COXBURSA331_A1552 2-phosphosulfolactate phosphatase; Belongs to the ComB family.
       0.776
ACT00802.1
PFAM: major facilitator superfamily MFS_1; KEGG: bsu:BSU10980 hypothetical protein.
 
     0.715
ACT00951.1
TIGRFAM: stage III sporulation protein AB; KEGG: bar:GBAA4416 stage III sporulation protein SpoAB.
 
     0.666
ACT00950.1
TIGRFAM: stage III sporulation protein AA; SMART: AAA ATPase; KEGG: bha:BH2797 mutants block sporulation after engulfment.
       0.638
ACT01473.1
PFAM: major facilitator superfamily MFS_1; KEGG: bha:BH3309 multidrug resistance protein.
 
     0.634
ACT00954.1
TIGRFAM: stage III sporulation protein AE; KEGG: bha:BH2793 mutants block sporulation after engulfment.
 
     0.504
ACT00953.1
TIGRFAM: stage III sporulation protein AD; KEGG: bsu:BSU24400 mutants block sporulation after engulfment (stage III sporulation).
 
     0.492
ACT00952.1
TIGRFAM: stage III sporulation protein AC; PFAM: Stage III sporulation AC family protein; KEGG: bha:BH2795 mutants block sporulation after engulfment.
       0.440
Your Current Organism:
Paenibacillus sp. JDR2
NCBI taxonomy Id: 324057
Other names: P. sp. JDR-2, Paenibacillus sp. JDR-2
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