STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACT01196.1Xylan 1,4-beta-xylosidase; PFAM: glycoside hydrolase family 52; KEGG: bha:BH2114 beta-xylosidase (1,4-beta-D-xylan xylohydrolase). (707 aa)    
Predicted Functional Partners:
ACT01642.1
Beta-galactosidase; PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; KEGG: aba:Acid345_0579 beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
     
 0.801
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
     
  0.800
uxaC
PFAM: Glucuronate isomerase; KEGG: bsu:BSU12300 glucuronate isomerase.
     
  0.800
aguA
Alpha-glucuronidase; PFAM: Glycosyl hydrolase 67 middle domain protein; glycosyl hydrolase 67 C-teriminal domain protein; glycoside hydrolase family 67; KEGG: bha:BH1061 alpha-glucuronidase; Belongs to the glycosyl hydrolase 67 family.
 
   
 0.651
ACT00625.1
TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: bsu:BSU03720 germination response to the combination of glucose, fructose, L-asparagine, and KCl.
  
     0.516
ACT01195.1
PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH1064 hypothetical protein.
       0.479
ACS99408.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH3681 sugar ABC transporter (permease).
  
     0.432
Your Current Organism:
Paenibacillus sp. JDR2
NCBI taxonomy Id: 324057
Other names: P. sp. JDR-2, Paenibacillus sp. JDR-2
Server load: medium (72%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.