STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACT01625.1PFAM: glycoside hydrolase family 43; KEGG: shw:Sputw3181_1949 glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 43 family. (325 aa)    
Predicted Functional Partners:
ACT01664.1
PFAM: Glycosyl hydrolase family 32 domain protein.
 
     0.616
ACT00352.1
PFAM: glycoside hydrolase family 43; Glycosyl hydrolase family 32 domain protein; KEGG: glycosyl hydrolase; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.615
ACT02238.1
PFAM: Glycosyl hydrolase family 32 domain protein; KEGG: lch:Lcho_3297 beta-fructofuranosidase; Belongs to the glycosyl hydrolase 43 family.
 
     0.611
ACT03867.1
PFAM: alpha-L-rhamnosidase; KEGG: aca:ACP_0773 alfa-L-rhamnosidase homolog.
 
     0.586
ACT02785.1
PFAM: Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; KEGG: scl:sce0966 hypothetical protein.
 
  
 0.585
ACT01237.1
KEGG: sus:Acid_3172 hypothetical protein.
  
     0.577
ACT01624.1
Transcriptional regulator, AraC family; PFAM: Cupin 2 conserved barrel domain protein; AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU08250 hypothetical protein.
       0.543
ACT02828.1
PFAM: glycoside hydrolase family 43; KEGG: hypothetical protein; Belongs to the glycosyl hydrolase 43 family.
  
     0.535
ACT03625.1
PFAM: glycoside hydrolase family 43; KEGG: scl:sce3118 hypothetical protein.
 
   
 0.492
ACT02906.1
PFAM: protein of unknown function DUF1680; KEGG: bha:BH1877 hypothetical protein.
 
     0.491
Your Current Organism:
Paenibacillus sp. JDR2
NCBI taxonomy Id: 324057
Other names: P. sp. JDR-2, Paenibacillus sp. JDR-2
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