STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACT04117.1Beta-galactosidase; PFAM: glycoside hydrolase family 35; KEGG: hypothetical protein LOC100158367; Belongs to the glycosyl hydrolase 35 family. (925 aa)    
Predicted Functional Partners:
ACT01843.1
Hypothetical protein; KEGG: aca:ACP_1583 melibiase family.
 
    0.652
ACT04116.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH0794 sugar transport system (permease) (binding protein dependent transporter).
  
    0.628
ACT02195.1
KEGG: bha:BH1870 hypothetical protein.
 
    0.614
ACT04115.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH0795 sugar transport system (permease) (binding protein dependent transporter).
  
    0.606
ACT02733.1
PFAM: protein of unknown function DUF291; S-layer domain protein; KEGG: sus:Acid_1472 glycoside hydrolase, clan GH-D.
 
    0.601
ACT02888.1
Alpha-galactosidase; PFAM: glycoside hydrolase clan GH-D; KEGG: alpha-galactosidase; K07407 alpha-galactosidase.
 
   
 0.580
ACT03555.1
Alpha-L-fucosidase-like protein; KEGG: rle:pRL100274 putative fucosidase.
 
   
 0.546
ACT04114.1
PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH0796 hypothetical protein.
 
     0.516
ACT00162.1
Alpha-L-fucosidase; PFAM: glycoside hydrolase family 29 (alpha-L-fucosidase); KEGG: hypothetical protein.
 
   
 0.479
ACT03846.1
Alpha-L-fucosidase; KEGG: xfm:Xfasm12_0086 alpha-L-fucosidase.
 
   
 0.462
Your Current Organism:
Paenibacillus sp. JDR2
NCBI taxonomy Id: 324057
Other names: P. sp. JDR-2, Paenibacillus sp. JDR-2
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