STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACT04581.1KEGG: cja:CJA_3068 hypothetical protein. (948 aa)    
Predicted Functional Partners:
ACT00564.1
Xylan 1,4-beta-xylosidase; PFAM: glycoside hydrolase family 43; KEGG: sde:Sde_0822 alpha-L-arabinofuranosidase; Belongs to the glycosyl hydrolase 43 family.
  
     0.757
xynA2
KEGG: pat:Patl_2657 endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; SMART: glycoside hydrolase family 10.
  
     0.755
ACT02884.1
Endo-1,4-beta-xylanase; KEGG: scl:sce6693 O-glycosyl hydrolase; PFAM: glycoside hydrolase family 10; SMART: glycoside hydrolase family 10.
  
     0.751
ACT02870.1
Cellulase; KEGG: bha:BH2120 alkaline xylanase A (1,4-beta-D-xylan xylanohydrolase); PFAM: glycoside hydrolase family 10; SMART: glycoside hydrolase family 10.
  
     0.739
ACT03278.1
Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 11; KEGG: bsu:BSU18840 endo-1,4-beta-xylanase; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
     0.739
ACT02879.1
KEGG: sus:Acid_4394 endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; Carbohydrate-binding CenC domain protein; Carbohydrate-binding family 9; SMART: glycoside hydrolase family 10.
  
     0.736
ACT02885.1
PFAM: glycoside hydrolase family 43; KEGG: sus:Acid_2993 glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 43 family.
  
     0.721
ACT02723.1
PFAM: lipolytic protein G-D-S-L family; KEGG: bha:BH1115 hypothetical protein.
 
 
   0.707
ACT04611.1
KEGG: hypothetical protein.
  
     0.707
aguA
Alpha-glucuronidase; PFAM: Glycosyl hydrolase 67 middle domain protein; glycosyl hydrolase 67 C-teriminal domain protein; glycoside hydrolase family 67; KEGG: bha:BH1061 alpha-glucuronidase; Belongs to the glycosyl hydrolase 67 family.
  
     0.703
Your Current Organism:
Paenibacillus sp. JDR2
NCBI taxonomy Id: 324057
Other names: P. sp. JDR-2, Paenibacillus sp. JDR-2
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