STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_0564PFAM: FAD dependent oxidoreductase; KEGG: rca:Rcas_1338 FAD dependent oxidoreductase. (406 aa)    
Predicted Functional Partners:
Caur_3584
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; KEGG: afw:Anae109_0766 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.802
Caur_3894
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rca:Rcas_3633 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.802
Caur_2612
TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: rca:Rcas_3533 glycine cleavage T protein (aminomethyl transferase); Belongs to the GcvT family.
  
 
 0.743
gcvT
Glycine cleavage system T protein; The glycine cleavage system catalyzes the degradation of glycine.
  
 
 0.743
Caur_0565
KEGG: rca:Rcas_2981 hypothetical protein.
       0.568
Caur_0613
PFAM: AMP-dependent synthetase and ligase; Enoyl-CoA hydratase/isomerase; Alcohol dehydrogenase GroES domain protein; KEGG: rrs:RoseRS_3202 AMP-dependent synthetase and ligase.
  
 
 0.555
Caur_1795
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
  
 0.533
SolA
Sarcosine oxidase; PFAM: FAD dependent oxidoreductase; KEGG: rrs:RoseRS_2528 sarcosine oxidase.
  
     0.491
Caur_3491
PFAM: thiamineS protein; KEGG: rrs:RoseRS_0722 thiamineS protein.
  
  
 0.473
Caur_3258
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: rca:Rcas_1903 glutamate synthase (ferredoxin).
  
  
 0.459
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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