STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_1197PFAM: cobalt transport protein; KEGG: sco:SCO2323 integral membrane protein. (377 aa)    
Predicted Functional Partners:
Caur_3579
PFAM: BioY protein; KEGG: cya:CYA_2210 BioY family protein.
  
 0.975
Caur_1003
KEGG: ace:Acel_0942 integral membrane protein.
 
 
 0.974
Caur_1201
TIGRFAM: LPXTG-motif cell wall anchor domain protein; KEGG: afu:AF1398 hypothetical protein.
 
    0.924
Caur_2574
Cobalt ABC transporter, ATPase subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
 
 0.921
Caur_3682
Cobalt ABC transporter, ATPase subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
 
 0.920
Caur_1658
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV5847 putative ABC transporter ATP-binding subunit.
 
 0.901
Caur_0792
PFAM: cobalt transport protein; KEGG: rrs:RoseRS_1922 cobalt transport protein.
     
  0.900
Caur_1200
KEGG: stp:Strop_4398 hypothetical protein.
 
     0.881
cbiM
Cobalamin biosynthesis protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
  
 
 0.859
Caur_3680
PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: rrs:RoseRS_0174 cobalamin (vitamin B12) biosynthesis CbiM protein.
  
 
 0.859
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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