STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_1272PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_4567 binding-protein-dependent transport systems inner membrane component. (296 aa)    
Predicted Functional Partners:
Caur_1271
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rca:Rcas_0115 binding-protein-dependent transport systems inner membrane component.
  0.994
Caur_1273
PFAM: extracellular solute-binding protein family 1; KEGG: rrs:RoseRS_4566 extracellular solute-binding protein, family 1.
 
 0.987
Caur_3449
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rrs:RoseRS_0525 ABC transporter related.
 
 0.967
Caur_1107
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: syn:slr1202 putative ABC-type lactose transport system permease protein.
   0.881
Caur_2675
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lin:lin0218 similar to sugar ABC transporters, permease proteins.
   0.879
Caur_0495
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ade:Adeh_4135 ABC sugar transporter, inner membrane subunit.
   0.874
Caur_2021
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ava:Ava_0461 binding-protein-dependent transport systems inner membrane component.
   0.873
Caur_1077
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC3281 sugar ABC transporter permease.
   0.869
Caur_3153
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ade:Adeh_4135 ABC sugar transporter, inner membrane subunit.
   0.869
Caur_3863
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fno:Fnod_1597 binding-protein-dependent transport systems inner membrane component.
 
   0.861
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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