STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppha_0766KEGG: cph:Cpha266_1359 hypothetical protein. (255 aa)    
Predicted Functional Partners:
Ppha_1997
KEGG: cph:Cpha266_0440 TonB-dependent receptor, putative.
  
     0.641
Ppha_0778
KEGG: pvi:Cvib_0555 hypothetical protein.
  
     0.639
Ppha_2666
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cph:Cpha266_0245 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
  
     0.628
Ppha_0765
Hypothetical protein.
       0.610
Ppha_1664
KEGG: cph:Cpha266_1274 hypothetical protein.
  
     0.588
Ppha_1990
KEGG: cte:CT1757 hypothetical protein.
  
     0.578
Ppha_0767
Hypothetical protein.
       0.568
Ppha_2603
KEGG: cph:Cpha266_0345 hypothetical protein.
  
     0.558
Ppha_0465
PFAM: hydroxyneurosporene synthase; KEGG: cph:Cpha266_0428 hydroxyneurosporene synthase.
  
     0.550
Ppha_0909
KEGG: pvi:Cvib_1196 hypothetical protein.
  
     0.539
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.