STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNBRP00000001913Uncharacterized protein. (187 aa)    
Predicted Functional Partners:
ENSNBRP00000031912
Heterogeneous nuclear ribonucleoprotein L like.
 
      0.899
ENSNBRP00000001884
RRM domain-containing protein.
 
      0.884
LOC102786086
Ubiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.853
LOC102781386
Heterogeneous nuclear ribonucleoprotein K, like.
   
 0.801
ENSNBRP00000015754
Heterogeneous nuclear ribonucleoprotein K.
   
 0.801
ENSNBRP00000021323
RRM domain-containing protein.
   
 0.791
HNRNPUL1
Heterogeneous nuclear ribonucleoprotein U like 1.
   
 0.761
LOC102796878
Heterogeneous nuclear ribonucleoprotein Ub.
   
 0.761
SRSF3
Serine and arginine rich splicing factor 3.
   
 0.728
LOC102779238
Uncharacterized protein.
   
0.711
Your Current Organism:
Neolamprologus brichardi
NCBI taxonomy Id: 32507
Other names: Lamprologus brichardi, N. brichardi, lyretail cichlid
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