STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNBRP00000005800Uncharacterized protein. (82 aa)    
Predicted Functional Partners:
LOC102785334
SCY domain-containing protein.
   
 0.863
LOC102776494
Chemokine (C-C motif) receptor 10; Belongs to the G-protein coupled receptor 1 family.
   
 0.703
LOC102784407
Chemokine (C-C motif) receptor 12a; Belongs to the G-protein coupled receptor 1 family.
    
 0.677
ENSNBRP00000004474
Chemokine (C-X-C motif) receptor 5; Belongs to the G-protein coupled receptor 1 family.
    
  0.676
LOC102795651
SCY domain-containing protein.
    
 0.610
LOC102788128
Chemokine (C-C motif) ligand 25b.
    
 0.610
LOC102796153
Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family.
   
 0.608
LOC102778997
Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family.
   
 0.608
LOC102790556
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
    
 0.607
CXCR4
C-X-C motif chemokine receptor 4; Belongs to the G-protein coupled receptor 1 family.
    
 0.607
Your Current Organism:
Neolamprologus brichardi
NCBI taxonomy Id: 32507
Other names: Lamprologus brichardi, N. brichardi, lyretail cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.