STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SECISBP2LSECIS binding protein 2 like. (1083 aa)    
Predicted Functional Partners:
LOC102798199
Sulfite oxidase.
   
 0.926
LOC102787549
Ribosomal protein L30.
   
 0.842
LOC102787825
Eukaryotic elongation factor, selenocysteine-tRNA-specific.
   
 0.838
LOC102786014
G protein pathway suppressor 1.
    
 0.838
ENSNBRP00000029086
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
  
 0.837
LOC102785293
Heat shock protein 5.
  
 0.829
ENSNBRP00000009369
Uncharacterized protein.
  
 0.829
ENSNBRP00000009431
Uncharacterized protein.
  
 0.829
ENSNBRP00000024650
Uncharacterized protein.
  
 0.829
LOC102792041
Endoplasmic reticulum oxidoreductase alpha.
   
 0.827
Your Current Organism:
Neolamprologus brichardi
NCBI taxonomy Id: 32507
Other names: Lamprologus brichardi, N. brichardi, lyretail cichlid
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.