STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
opgHGlycosyl transferase, family 2; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs). (727 aa)    
Predicted Functional Partners:
opgG
Periplasmic glucan biosynthesis protein, MdoG; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs).
 
  
 0.948
opgD
Periplasmic glucan biosynthesis protein, MdoG; Probably involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans (OPGs).
 
  
 0.835
Sbal_2559
Periplasmic glucan biosynthesis protein, MdoG; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs).
 
  
 0.835
plsB
PFAM: phospholipid/glycerol acyltransferase; KEGG: she:Shewmr4_3788 glycerol-3-phosphate O-acyltransferase; Belongs to the GPAT/DAPAT family.
   
 
 0.530
Sbal_4078
PFAM: acyltransferase 3; KEGG: she:Shewmr4_3653 acyltransferase 3.
 
   
 0.461
Sbal_1178
PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: shm:Shewmr7_2954 glutamate synthase (ferredoxin).
     
 0.445
Sbal_1898
PFAM: Peptidoglycan-binding domain 1 protein; KEGG: she:Shewmr4_1831 peptidoglycan-binding domain 1 protein.
       0.429
Your Current Organism:
Shewanella baltica
NCBI taxonomy Id: 325240
Other names: S. baltica OS155, Shewanella baltica OS155, Shewanella baltica str. OS155, Shewanella baltica strain OS155
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