node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Sama_0191 | selD | Sama_0191 | Sama_0190 | Delta-9 acyl-phospholipid desaturase; KEGG: sdn:Sden_0229 stearoyl-CoA 9-desaturase. | Selenophosphate synthase; Synthesizes selenophosphate from selenide and ATP. | 0.785 |
Sama_0191 | selU | Sama_0191 | Sama_0189 | Delta-9 acyl-phospholipid desaturase; KEGG: sdn:Sden_0229 stearoyl-CoA 9-desaturase. | tRNA 2-selenouridine synthase; Involved in the post-transcriptional modification of the uridine at the wobble position (U34) of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Catalyzes the conversion of 2-thiouridine (S2U-RNA) to 2- selenouridine (Se2U-RNA). Acts in a two-step process involving geranylation of 2-thiouridine (S2U) to S-geranyl-2-thiouridine (geS2U) and subsequent selenation of the latter derivative to 2-selenouridine (Se2U) in the tRNA chain. | 0.543 |
Sama_1543 | Sama_1544 | Sama_1543 | Sama_1544 | KEGG: cps:CPS_3309 putative phosphonate ABC transporter, periplasmic phosphonate-binding protein. | KEGG: sdn:Sden_1898 ABC transporter related. | 0.995 |
Sama_1543 | Sama_1545 | Sama_1543 | Sama_1545 | KEGG: cps:CPS_3309 putative phosphonate ABC transporter, periplasmic phosphonate-binding protein. | KEGG: sdn:Sden_1897 binding-protein-dependent transport systems inner membrane component. | 0.991 |
Sama_1543 | selD | Sama_1543 | Sama_0190 | KEGG: cps:CPS_3309 putative phosphonate ABC transporter, periplasmic phosphonate-binding protein. | Selenophosphate synthase; Synthesizes selenophosphate from selenide and ATP. | 0.538 |
Sama_1543 | selU | Sama_1543 | Sama_0189 | KEGG: cps:CPS_3309 putative phosphonate ABC transporter, periplasmic phosphonate-binding protein. | tRNA 2-selenouridine synthase; Involved in the post-transcriptional modification of the uridine at the wobble position (U34) of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Catalyzes the conversion of 2-thiouridine (S2U-RNA) to 2- selenouridine (Se2U-RNA). Acts in a two-step process involving geranylation of 2-thiouridine (S2U) to S-geranyl-2-thiouridine (geS2U) and subsequent selenation of the latter derivative to 2-selenouridine (Se2U) in the tRNA chain. | 0.689 |
Sama_1544 | Sama_1543 | Sama_1544 | Sama_1543 | KEGG: sdn:Sden_1898 ABC transporter related. | KEGG: cps:CPS_3309 putative phosphonate ABC transporter, periplasmic phosphonate-binding protein. | 0.995 |
Sama_1544 | Sama_1545 | Sama_1544 | Sama_1545 | KEGG: sdn:Sden_1898 ABC transporter related. | KEGG: sdn:Sden_1897 binding-protein-dependent transport systems inner membrane component. | 0.994 |
Sama_1544 | selU | Sama_1544 | Sama_0189 | KEGG: sdn:Sden_1898 ABC transporter related. | tRNA 2-selenouridine synthase; Involved in the post-transcriptional modification of the uridine at the wobble position (U34) of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Catalyzes the conversion of 2-thiouridine (S2U-RNA) to 2- selenouridine (Se2U-RNA). Acts in a two-step process involving geranylation of 2-thiouridine (S2U) to S-geranyl-2-thiouridine (geS2U) and subsequent selenation of the latter derivative to 2-selenouridine (Se2U) in the tRNA chain. | 0.491 |
Sama_1545 | Sama_1543 | Sama_1545 | Sama_1543 | KEGG: sdn:Sden_1897 binding-protein-dependent transport systems inner membrane component. | KEGG: cps:CPS_3309 putative phosphonate ABC transporter, periplasmic phosphonate-binding protein. | 0.991 |
Sama_1545 | Sama_1544 | Sama_1545 | Sama_1544 | KEGG: sdn:Sden_1897 binding-protein-dependent transport systems inner membrane component. | KEGG: sdn:Sden_1898 ABC transporter related. | 0.994 |
Sama_1545 | selD | Sama_1545 | Sama_0190 | KEGG: sdn:Sden_1897 binding-protein-dependent transport systems inner membrane component. | Selenophosphate synthase; Synthesizes selenophosphate from selenide and ATP. | 0.420 |
Sama_1545 | selU | Sama_1545 | Sama_0189 | KEGG: sdn:Sden_1897 binding-protein-dependent transport systems inner membrane component. | tRNA 2-selenouridine synthase; Involved in the post-transcriptional modification of the uridine at the wobble position (U34) of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Catalyzes the conversion of 2-thiouridine (S2U-RNA) to 2- selenouridine (Se2U-RNA). Acts in a two-step process involving geranylation of 2-thiouridine (S2U) to S-geranyl-2-thiouridine (geS2U) and subsequent selenation of the latter derivative to 2-selenouridine (Se2U) in the tRNA chain. | 0.603 |
mnmA | mnmC | Sama_2062 | Sama_2155 | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | glycine/D-amino acid oxidase (deaminating)-like protein; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the N-terminal section; belongs to the methyltransferase superfamily. tRNA (mnm(5)s(2)U34)-methyltransferase family. | 0.522 |
mnmA | selU | Sama_2062 | Sama_0189 | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | tRNA 2-selenouridine synthase; Involved in the post-transcriptional modification of the uridine at the wobble position (U34) of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Catalyzes the conversion of 2-thiouridine (S2U-RNA) to 2- selenouridine (Se2U-RNA). Acts in a two-step process involving geranylation of 2-thiouridine (S2U) to S-geranyl-2-thiouridine (geS2U) and subsequent selenation of the latter derivative to 2-selenouridine (Se2U) in the tRNA chain. | 0.576 |
mnmA | thiI | Sama_2062 | Sama_2431 | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | Thiamine biosynthesis/tRNA modification protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.439 |
mnmC | mnmA | Sama_2155 | Sama_2062 | glycine/D-amino acid oxidase (deaminating)-like protein; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the N-terminal section; belongs to the methyltransferase superfamily. tRNA (mnm(5)s(2)U34)-methyltransferase family. | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | 0.522 |
mnmC | selU | Sama_2155 | Sama_0189 | glycine/D-amino acid oxidase (deaminating)-like protein; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the N-terminal section; belongs to the methyltransferase superfamily. tRNA (mnm(5)s(2)U34)-methyltransferase family. | tRNA 2-selenouridine synthase; Involved in the post-transcriptional modification of the uridine at the wobble position (U34) of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Catalyzes the conversion of 2-thiouridine (S2U-RNA) to 2- selenouridine (Se2U-RNA). Acts in a two-step process involving geranylation of 2-thiouridine (S2U) to S-geranyl-2-thiouridine (geS2U) and subsequent selenation of the latter derivative to 2-selenouridine (Se2U) in the tRNA chain. | 0.583 |
selD | Sama_0191 | Sama_0190 | Sama_0191 | Selenophosphate synthase; Synthesizes selenophosphate from selenide and ATP. | Delta-9 acyl-phospholipid desaturase; KEGG: sdn:Sden_0229 stearoyl-CoA 9-desaturase. | 0.785 |
selD | Sama_1543 | Sama_0190 | Sama_1543 | Selenophosphate synthase; Synthesizes selenophosphate from selenide and ATP. | KEGG: cps:CPS_3309 putative phosphonate ABC transporter, periplasmic phosphonate-binding protein. | 0.538 |